Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq225 98.7 1e-15 seq6728 95.1 2e-14 seq6726 95.1 2e-14 seq361 95.1 2e-14 seq299 95.1 2e-14 seq143 95.1 2e-14 seq148 89.7 7e-13 seq774 86.0 8e-12 seq689 86.0 8e-12 seq554 86.0 8e-12 seq335 86.0 8e-12 seq229 86.0 8e-12 seq55 86.0 8e-12 seq34 86.0 8e-12 >seq225 Length=846181 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || |||||||||||||||||| |||| ||||| | ||||||||||||||||||||| Sbjct 303185 TCCCCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 303244 Query 8718 CCCGACGAGGAG 8729 |||| ||||||| Sbjct 303245 CCCGCCGAGGAG 303256 Score = 93.3 bits (102), Expect = 6e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||||| |||||| |||||||||||||||||| | |||| |||||||| ||||||||| Sbjct 303256 CTCCTCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 303197 Query 139413 TACTAACGAGGATTTT 139428 ||||| || |||| || Sbjct 303196 TACTACCGGGGATGTT 303181 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| || |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 303185 TCCCCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 303244 Query 11789 CCCGACGAGGAG 11800 |||| ||||||| Sbjct 303245 CCCGCCGAGGAG 303256 >seq6728 Length=204246 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 200559 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 200500 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 200499 CCCGCCGTGGAG 200488 Score = 93.3 bits (102), Expect = 6e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 200486 AACTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 200545 Query 139411 TATACTAACGAGGATTTTG 139429 ||||||| |||||||| || Sbjct 200546 TATACTACCGAGGATTGTG 200564 Score = 93.3 bits (102), Expect = 6e-14 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 11715 GGTTGTGTAACC-CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGA 11772 || ||| ||| | || |||||| |||||||||||| ||||| |||| ||||| | ||||| Sbjct 200575 GGCTGTATAATCACAATCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGA 200516 Query 11773 GACCGGGGTTCGATTCCCCGACGAGGAG 11800 |||||||||||||||||||| || |||| Sbjct 200515 GACCGGGGTTCGATTCCCCGCCGTGGAG 200488 >seq6726 Length=1105856 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 76391 TAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 76450 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 76451 TTCCCCGCCGTGGAG 76465 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 77245 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 77304 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 77305 CCCGCCGTGGAG 77316 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 105311 TAATCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 105252 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 105251 TTCCCCGCCGTGGAG 105237 Score = 93.3 bits (102), Expect = 6e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 105235 AACTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 105294 Query 139411 TATACTAACGAGGATTTTG 139429 ||||||| |||||||| || Sbjct 105295 TATACTACCGAGGATTATG 105313 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 76394 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 76453 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 76454 CCCGCCGTGGAG 76465 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||| Sbjct 77242 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 77301 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| || |||| Sbjct 77302 TTCCCCGCCGTGGAG 77316 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 105308 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 105249 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 105248 CCCGCCGTGGAG 105237 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 76465 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 76406 Query 139413 TACTAACGAGGATTTTG 139429 ||||| |||||||| || Sbjct 76405 TACTACCGAGGATTATG 76389 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 77316 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 77257 Query 139413 TACTAACGAGGATTTTG 139429 ||||| |||||||| || Sbjct 77256 TACTACCGAGGATTGTG 77240 >seq361 Length=515654 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 445793 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 445852 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 445853 CCCGCCGTGGAG 445864 Score = 93.3 bits (102), Expect = 6e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 445790 CAATCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 445849 Query 11786 TTCCCCGACGAGGAGG 11801 ||||||| || ||||| Sbjct 445850 TTCCCCGCCGTGGAGG 445865 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 445864 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 445805 Query 139413 TACTAACGAGGATTTTG 139429 ||||| |||||||| || Sbjct 445804 TACTACCGAGGATTGTG 445788 >seq299 Length=1166076 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 728547 TAATCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 728488 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 728487 TTCCCCGCCGTGGAG 728473 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 728472 ACTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 728531 Query 139412 ATACTAACGAGGATT 139426 |||||| |||||||| Sbjct 728532 ATACTACCGAGGATT 728546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 728544 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 728485 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 728484 CCCGCCGTGGAG 728473 >seq143 Length=532421 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 86444 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 86385 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 86384 CCCGCCGTGGAG 86373 Score = 93.3 bits (102), Expect = 6e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 86371 AACTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 86430 Query 139411 TATACTAACGAGGATT 139426 ||||||| |||||||| Sbjct 86431 TATACTACCGAGGATT 86446 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 86447 CAATCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 86388 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| || |||| Sbjct 86387 TTCCCCGCCGTGGAG 86373 >seq148 Length=1369482 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 549585 TCCGCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 549526 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 549525 CCCGCCGCGGAG 549514 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || || ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 446021 TAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 445962 Query 8715 TTCCCCGACG 8724 ||||||| || Sbjct 445961 TTCCCCGCCG 445952 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| || ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 549585 TCCGCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 549526 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 549525 CCCGCCGCGGAG 549514 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 |||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 445946 ACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 446005 Query 139412 ATACTAACGAGGATTTTG 139429 |||||| ||| |||| || Sbjct 446006 ATACTACCGAAGATTATG 446023 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 446018 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 445959 Query 11789 CCCGACG 11795 |||| || Sbjct 445958 CCCGCCG 445952 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 549514 CTCCGCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 549573 Query 139413 TACTAACGAGGAT 139425 ||||| || |||| Sbjct 549574 TACTACCGCGGAT 549586 >seq774 Length=60200 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 40618 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 40677 Query 8718 CCCGACG 8724 |||| || Sbjct 40678 CCCGCCG 40684 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 40618 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 40677 Query 11789 CCCGACG 11795 |||| || Sbjct 40678 CCCGCCG 40684 >seq689 Length=113138 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1433 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1492 Query 8718 CCCGACG 8724 |||| || Sbjct 1493 CCCGCCG 1499 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1433 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1492 Query 11789 CCCGACG 11795 |||| || Sbjct 1493 CCCGCCG 1499 >seq554 Length=358752 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 218037 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 218096 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 218097 TCCCCGCCG 218105 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 218039 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 218098 Query 8718 CCCGACG 8724 |||| || Sbjct 218099 CCCGCCG 218105 >seq335 Length=783708 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||| Sbjct 331964 AGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 332023 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 332024 TCCCCGCCG 332032 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 331966 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 332025 Query 8718 CCCGACG 8724 |||| || Sbjct 332026 CCCGCCG 332032 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 332311 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 332252 Query 8718 CCCGACG 8724 |||| || Sbjct 332251 CCCGCCG 332245 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 409801 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 409742 Query 8718 CCCGACG 8724 |||| || Sbjct 409741 CCCGCCG 409735 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 410442 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 410383 Query 8718 CCCGACG 8724 |||| || Sbjct 410382 CCCGCCG 410376 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||| Sbjct 332312 GTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 332253 Query 11788 CCCCGACG 11795 ||||| || Sbjct 332252 CCCCGCCG 332245 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||| Sbjct 409807 ACACAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 409748 Query 11783 CGATTCCCCGACG 11795 |||||||||| || Sbjct 409747 CGATTCCCCGCCG 409735 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 410442 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 410383 Query 11789 CCCGACG 11795 |||| || Sbjct 410382 CCCGCCG 410376 >seq229 Length=252579 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 194989 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 194930 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 194929 TCCCCGCCG 194921 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 194987 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 194928 Query 8718 CCCGACG 8724 |||| || Sbjct 194927 CCCGCCG 194921 >seq55 Length=1115010 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 675545 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 675486 Query 8718 CCCGACG 8724 |||| || Sbjct 675485 CCCGCCG 675479 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||| Sbjct 675546 GTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 675487 Query 11788 CCCCGACG 11795 ||||| || Sbjct 675486 CCCCGCCG 675479 >seq34 Length=952033 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 306871 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 306930 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 306931 TCCCCGCCG 306939 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 306873 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 306932 Query 8718 CCCGACG 8724 |||| || Sbjct 306933 CCCGCCG 306939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652784836205120