Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq109 87.8 3e-12 >seq109 Length=1733701 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 127429 AGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTTAGCAAAACC 127488 |||||| || |||||||| || ||||| ||| || |||| || |||| || || Sbjct 1666607 AGGATCTCCAGCATACATATCACCAGATGTTCTAATGTGTAAGCCTTACTTAGGCAAGCC 1666666 Query 127489 GTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACAATTTCCATT 127548 |||||| | ||||| |||||||| || | || |||||| | ||||||||||||||||| Sbjct 1666667 ATCAGATATGTGGGCATTAGGAGTTGTTCTATACACAATGTTGTACGGACAATTTCCATT 1666726 Query 127549 TTATGA 127554 | ||| Sbjct 1666727 CTGTGA 1666732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704517684106560