Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq38739 109 4e-19 >seq38739 Length=464 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096 ||||| || || ||||| ||||||||||| ||||| |||||||| | ||||||||| | Sbjct 269 ATATTTAGCGCCAAAATGTCTCCACTGAAACCCATAAACAGGTCCTAAATCTCCTTCTTG 210 Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156 || ||| || ||||| | || | ||| |||| || || || || ||| || | Sbjct 209 TCGATCAGTGAACCCAAGACTGTCGAGAAAAGATCGGGACCCGTTTGCGGACCAGATTTT 150 Query 102157 CACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTC 102216 ||| ||| | |||| || ||| ||||| ||| | ||||||||| | ||||| Sbjct 149 CACTCCAAGTTTGGATAATTCATTGGAATCAGTGCTTCCGCGGATAAACCAAAGAAGTTC 90 Query 102217 TTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||| | ||| ||||||||||| | || || || || || | ||| || Sbjct 89 TTCGAGAACTCCTCTCCAAAAGATTCGTTTTGTTGTCAATAATGGCAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360785957110421