Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq71986 113 5e-20 >seq71986 Length=2235 Score = 113 bits (124), Expect = 5e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| |||||||| || || | ||||| ||||||||||| | || || ||||| Sbjct 716 AAAATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGCG 657 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | | |||| ||| |||| ||||||||||| || || | || Sbjct 656 AGTGATACCATAGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATACCTCCCGAT 597 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| |||| || | |||||| ||||| || || |||| || || |||| || ||| Sbjct 596 CAGCAGAGACTTATATTCGCGGGTAAACAACTCGAAGACGGCCGTACTCTCAGTGATTAC 537 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||| || || || | || || ||| | || | || |||| || |||| Sbjct 536 AACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGGCG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514538653398960