Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq93292 228 2e-54 >seq93292 Length=5156 Score = 228 bits (252), Expect = 2e-54 Identities = 325/455 (71%), Gaps = 2/455 (0%) Strand=Plus/Plus Query 189282 TTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGATAGTATCC 189341 |||| | |||||| || | |||||||||||||| ||||| || ||||||||| | Sbjct 989 TTGTTCGCAGAGAATTAGCCGATAATTTTTGTTATTATAATGAAAATTATGATAAATTGG 1048 Query 189342 AGTCTACTCATTCATGGGCCAGAAAAACATTAGAAGATCACATTAATGATCCTAGAAAGT 189401 || | | || |||||| ||||||||||| | ||||||| || || ||| ||| Sbjct 1049 AGGGCAGTTATGAATGGGCACGAAAAACATTAAATGATCACAAAAAAGACAAAAGAGAGT 1108 Query 189402 ATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGT 189461 || | ||| | || | | ||||||| ||||| ||| ||||||| ||| Sbjct 1109 ATTTGTATAGTTTGGAAGAGTTTGAAAAAGGTCTGACTCACGATGACTTATGGAATGCGG 1168 Query 189462 CACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTA 189521 | || || || ||||| ||||| |||||||||||| | ||| | || ||||||||||| | Sbjct 1169 CGCAGATACAAATGGTTAGAGACGGAAAAATGCATGGATTTCTCCGTATGTATTGGGCAA 1228 Query 189522 AGAAGATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTG 189580 |||| ||||| || ||||| | |||| ||| | || || || || | ||| ||||| Sbjct 1229 AGAAAATACTGGAGTGGACCGAATCACCCGAACAAGCGTTAGAATT-TGCTATTTATTTA 1287 Query 189581 AACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCT 189640 || | || |||||| | || || | ||||| ||||||||||| ||||||||||||||| Sbjct 1288 AATGATAAATACGAATTGGATGGAAGAGATCCGAACGGATACGTCGGTTGTATGTGGTCT 1347 Query 189641 ATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATAT 189700 || || || | |||||| | |||||||| || || | |||||||| ||| | | | Sbjct 1348 ATATGTGGTGTTCACGATCAGGGATGGAAAGAGAGGCCTGTCTTTGGAAAAATACGTTTT 1407 Query 189701 ATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 189735 ||||| ||| | | | ||| ||||| ||||| Sbjct 1408 ATGAACTATAATGGATGTAAACGTAAATTCGATGT 1442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921977360886840