Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq64116 141 8e-29 seq71986 116 3e-21 >seq64116 Length=3934 Score = 141 bits (156), Expect = 8e-29 Identities = 176/239 (74%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 57503 GTCCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATA 57562 ||| |||||||||||| | | |||||||| | | || ||| | |||||||| ||||| Sbjct 2331 GTCAGATGAACCACTTCTTCGTGAGAATCCAAGGCGTTTCGTCGTATTTCCGATCGAATA 2390 Query 57563 TCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGT 57622 | | ||||||||| | ||||| || || || || || || || ||||| || |||||||| Sbjct 2391 TACGGACATTTGGCAGATGTATAAGAAAGCTGAGGCCTCCTTCTGGACAGTAGAAGAAGT 2450 Query 57623 AGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGAGAGAAATTTT 57680 ||| || | || | ||||||||| || || | ||||| ||| | ||||| Sbjct 2451 AGATCTCGGGAGAGACTTAAGCGATTGGAATAAACTTAATAAGAA--TGAAAAGCATTTT 2508 Query 57681 ATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 || |||||||||||| || || ||||| |||||| ||||||||||| ||| |||| Sbjct 2509 ATATCACACGTGTTGGCATTCTTTGCCGCCAGCGATGGGATTGTTAACGAAAATCTGGT 2567 >seq71986 Length=2235 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| |||| || ||||| ||||| | || |||||| || Sbjct 716 AAAATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGCG 657 Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || | | || | || || || ||| | |||||| || || | || ||||| Sbjct 656 AGTGATACCATAGAGAATGTAAAGGCAAAGATTCA-GGACAAAGAGGGTATACCTCCCGA 598 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| | || |||||||| || ||||| | |||||| ||| | || ||||| Sbjct 597 TCAGCAGAGACTTATATTCGCGGGTAAACAACTCGAAGACGGCCGTACTCTCAGTGATTA 538 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||||||||||| ||||||||| |||| ||| | ||||| || || Sbjct 537 CAACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGG 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445177592734320