Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq64116 136 5e-27 >seq64116 Length=3934 Score = 136 bits (150), Expect = 5e-27 Identities = 230/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 35968 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 36027 || |||||| || | || |||||| || || |||| || ||||| ||||| | || Sbjct 3284 AACTCCCAACTCTTGGAGCAGTCTATCGGCCACGTATTCGATGTATGTCTTCATGAGATC 3225 Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087 |||||||| || || || || || || | || | || ||||| || ||||||||| Sbjct 3224 GCAATTCATGCCAATCAGATTCACAGGCAATGCTTCCGTTAGAAACTCCTGTTCAATAAC 3165 Query 36088 GACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT 36147 ||||| ||| | | || | ||| | || ||| ||| | | | ||| | Sbjct 3164 AACCGCTTCTTTCACTATTTGCAAAACTTTCTCCTCATATGGTTTGTTCTCAATGTGTCT 3105 Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 || | | ||| ||||||||||| || || || || || | | ||| | ||| || Sbjct 3104 GAATAGAAGACACGCGAAATCGCAATGAAGTCCTTCATCGCGAGAAATAAGTTCATTACT 3045 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 ||||| | ||| ||||| || || |||||||||||||| |||||||| || || || || Sbjct 3044 GAACGTCAATCCAGGCATAAGTCCGCGCTTTTTAAGCCAGAATATGGAAGCGAAGGAACC 2985 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 | ||||||||||||||| |||| ||| || || Sbjct 2984 ACTAAAGAAAATTCCTTCGACTGACGCGAAAGC 2952 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 |||||| || || || || || ||||| ||||| || ||||| || ||| |||||||| Sbjct 2562 ATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAAATG 2503 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 36663 ||||| || | |||||||||||||| | | ||| | | ||| |||||||| Sbjct 2502 CTTTTCATTCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTCTTC 2443 Query 36664 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 36723 |||||||| || || ||||| || || |||||||| | ||| ||||| ||||| || Sbjct 2442 TACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTCGAT 2383 Query 36724 TGGAAA 36729 ||||| Sbjct 2382 CGGAAA 2377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657303427775640