Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq64116 100 3e-16 >seq64116 Length=3934 Score = 100 bits (110), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 ||| |||||| ||||| || ||||| || || ||||| |||||||| | || | |||| Sbjct 2566 CCAGATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAA 2507 Query 14317 AGTATTGCTCTTCATTGTTG---AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTA 14373 | | ||| |||||| || ||||| ||||||||| ||| || | ||||||| Sbjct 2506 AAT---GCTTTTCATTCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTA 2450 Query 14374 CTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTAT 14433 |||| || |||||||| || || ||||||| |||||||| ||| || || ||| Sbjct 2449 CTTCTTCTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTAT 2390 Query 14434 ATAATATAGGAAAAACTACAAA 14455 || || ||||| || || || Sbjct 2389 ATTCGATCGGAAATACGACGAA 2368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479094333281400