Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq64116 100 3e-16 >seq64116 Length=3934 Score = 100 bits (110), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 ||||| |||||||| ||||| || || ||||| |||||||| | || | ||||| | Sbjct 2561 TTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAAAT-- 2504 Query 14110 TGCTCTTCATTGTTG---AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCA 14166 ||| |||||| || ||||| ||||||||| ||| || | ||||||||||| Sbjct 2503 -GCTTTTCATTCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTCT 2445 Query 14167 TCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAAT 14226 || |||||||| || || ||||||| |||||||| ||| || || ||||| Sbjct 2444 TCTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTCG 2385 Query 14227 ATAGGAAAAACTACAAA 14243 || ||||| || || || Sbjct 2384 ATCGGAAATACGACGAA 2368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477956638036440