Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06]
105,671 sequences; 100,532,934 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq71986 132 3e-26
seq97621 87.8 1e-12
>seq71986
Length=2235
Score = 132 bits (146), Expect = 3e-26
Identities = 175/240 (73%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195
||| ||||||| | | ||| |||||||| || || |||||||| ||||||||||| ||
Sbjct 486 GCCTCCTCTCAGCCGAAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACT 545
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
||| | | ||||||| | |||||| || ||| |||| | | || || ||| ||
Sbjct 546 GAGAGTACGGCCGTCTTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGG 605
Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|| || |||||||| ||| ||||| ||||||| | ||||||||||| || ||| |
Sbjct 606 TATACCCTCTTTGTCCTGAATCTTTGC-CTTTACATTCTCTATGGTATCACTCGCTTCAA 664
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374
| || | || ||||||||||| |||| || || || || || ||||| || | ||||
Sbjct 665 CTTCAAGAGTGATGGTTTTACCCGTCAATGTCTTCACGAATATCTGCATTTTGGCCAATA 724
>seq97621
Length=3513
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| ||||| || ||||| || || ||||| ||||| || | | | ||||| | ||
Sbjct 3298 ATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCTGAGTGTGCGGCCATCTTCGAGCTG 3357
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT-CACAAATTT 15278
||| |||||| | || | | || || || ||||| |||||||||| | | |||
Sbjct 3358 TTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTT 3417
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
|||| || ||| | || ||||||||| || || ||||| |||||||| || || |
Sbjct 3418 TGCT-TTCACATTCTCAATGGTATCGGACGGCTCAACCTCTAAAGTAATGGTCTTTCCGG 3476
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
||| || || ||||| || |||||
Sbjct 3477 TCAATGTCTTCACAAATATCTGCAT 3501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361712761971411
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |