Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq71986 86.0 5e-12 >seq71986 Length=2235 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||||| || || | |||| || | || || || |||||||| |||||||| Sbjct 487 CCTCCTCTCAGCCGAAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTG 546 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | |||| || || ||||||||||| | ||||||||||||||||| || Sbjct 547 AGAGTACGGCCGTCTTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGT 606 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||||||||| ||| || ||||| | | | ||||| | | || | Sbjct 607 ATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACT 666 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | || ||||||||||| || || || || || || || |||||||| Sbjct 667 TCAAGAGTGATGGTTTTACCCGTCAATGTCTTCACGAATATCTGCATTTT 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414038886071374