Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq94831 95.1 6e-15 seq102392 87.8 9e-13 >seq94831 Length=1830 Score = 95.1 bits (104), Expect = 6e-15 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| |||||||||| || |||||||||| |||| | ||||||||||||||| || Sbjct 847 AAAAAAAAAATTGGCCCGTGGGGGGATCGAACCCACGACNTCCGCGTTATTAGCACGGCG 788 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||| |||| ||||||||| ||||| || Sbjct 787 CTCTAACCATCTGAGCTAACGGGCCATC 760 >seq102392 Length=1934 Score = 87.8 bits (96), Expect = 9e-13 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| |||| | ||||||||||||||| |||||| |||||| Sbjct 689 TGGCCCGTGGGGGGATCGAACCCACGACNTCCGCGTTATTAGCACGGCGCTCTAACCAAC 630 Query 11516 TGAGCTAATGGGCCGTC 11532 |||||||| ||||| || Sbjct 629 TGAGCTAACGGGCCATC 613 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261154434553996