Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq95232 120 3e-22 seq71986 107 2e-18 seq97621 95.1 1e-14 >seq95232 Length=1676 Score = 120 bits (132), Expect = 3e-22 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 ||||| | |||||||||||| | ||| | ||| || || ||||||||| |||| || Sbjct 196 TTTTGAATGTTATAATCGCTTAAAGTTCTTCCATCTTCGAGTTGTTTTCCGGCAAATATC 255 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 |||||||||||||| |||||||| ||||| | ||| |||||||| || || Sbjct 256 AATCTTTGCTGATCCGGAGGAATNNNNNNNTTGTCCTGAATCTTTGCCTTCACATTCTCG 315 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | || || | | ||||| || | |||||||| ||||| || | || ||||||||| Sbjct 316 ATGGTATCCGAAGGCTCGACCTCTAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAG 375 Query 95000 ATCTGCAT 95007 |||||||| Sbjct 376 ATCTGCAT 383 >seq71986 Length=2235 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||||| || | ||||| || | ||| ||||| ||||| | ||| ||||| || Sbjct 487 CCTCCTCTCAGCCGAAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTG 546 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | || || || ||||| || | || || | ||| |||||||| ||||| Sbjct 547 AGAGTACGGCCGTCTTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGT 606 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | ||| |||||||| || | | || ||| || || Sbjct 607 ATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACT 666 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||||||||| || || | || ||||| || |||||||| Sbjct 667 TCAAGAGTGATGGTTTTACCCGTCAATGTCTTCACGAATATCTGCAT 713 >seq97621 Length=3513 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || || || || | || || ||||| | ||| | ||| || ||||||||||| Sbjct 3305 GTTGACTCTTTCTGGATATTGTAGTCGCTGAGTGTGCGGCCATCTTCGAGCTGTTTTCCA 3364 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | ||| |||||||| |||||||| ||||||||||| | |||||||| || Sbjct 3365 GCGAAGATAAGTCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTTTGCTTTC 3424 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | || || || | || ||||| ||||| || | || Sbjct 3425 ACATTCTCAATGGTATCGGACGGCTCAACCTCTAAAGTAATGGTCTTTCCGGTCAATGTC 3484 Query 94991 TTCACAAAGATCTGCAT 95007 |||||||| |||||||| Sbjct 3485 TTCACAAATATCTGCAT 3501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447699057757560