Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq101090 109 9e-19 >seq101090 Length=3278 Score = 109 bits (120), Expect = 9e-19 Identities = 225/326 (69%), Gaps = 9/326 (3%) Strand=Plus/Plus Query 193875 GGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTC 193934 || || || || |||||||| |||||||| | || ||||| ||| | ||| | Sbjct 32 GGCGTCGCTAAATTGTATGGCTATTGGATTGTTGTTAACTATCGCGAGGCTTATAATATA 91 Query 193935 CACGCTAGTTC-TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGT 193993 || ||| ||||||||| |||||||| |||||||| ||||||| || || ||||| Sbjct 92 TTTGC-AGTCAATGGTATTCTATTCAATCATGAATCTCCGCGAAGAGGAGAAACTTTTGT 150 Query 193994 AACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACA--GAAGATTCTT 194051 || | || || | | | | ||||||||| | || || | ||| ||| | Sbjct 151 CACGAGGAAAATAAGCAGATCTGTGGCTAAGATCT-TATTAAATGAATTGGAATATTTTG 209 Query 194052 TATCTTGGTAATCTTA-ATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGC 194110 || | | || |||| | || ||| | |||||||| ||||| | || ||||| ||||| Sbjct 210 AAT--TAGGAAACTTAGACGCAAAGCGTGATTGGGGTCACGCCAGAGACTATGTCGAAGC 267 Query 194111 GATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACA 194170 ||||||| | ||| | ||||||||| ||| || || ||||| || | || || ||| Sbjct 268 GATGTGGCTCATGCTTCAACAGGATACACCTGAAGACTATGTTATATCCACCGGAGAATC 327 Query 194171 GTATTCTGTTAGAGACTTTG-TGAAT 194195 ||||||| | ||| |||| ||||| Sbjct 328 TCATTCTGTCAAAGAATTTGTTGAAT 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806488510430760