Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq64116 84.2 2e-11 >seq64116 Length=3934 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 21866 TTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATAT 21925 ||||| || || || ||||| ||||||||||| |||||||| | | | |||||||| Sbjct 2561 TTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAAATGC 2502 Query 21926 CGTTCGTTATCTGTTAATTTT-TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTC 21984 ||| || | | |||| ||| |||||||| ||| ||| | | |||||||||||| Sbjct 2501 TTTTCATTCT-TATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTCTTC 2443 Query 21985 AGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTAT 22044 |||||| ||| || ||| || |||||||| ||| || || ||||| || Sbjct 2442 TACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTCGAT 2383 Query 22045 TGGAAATA 22052 ||||||| Sbjct 2382 CGGAAATA 2375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531198218882040