Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq71986 141 9e-29 seq97621 109 5e-19 seq95232 102 8e-17 >seq71986 Length=2235 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || || ||||| || || ||| | ||||| | ||| | ||| | Sbjct 717 CAAAATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGC 658 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | || ||||| ||| | || || ||||||| |||||||| || ||||||||||| Sbjct 657 GAGTGATACCATAGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATACCTCCCGA 598 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| || | || || |||||||||||||| | | | |||| || || Sbjct 597 TCAGCAGAGACTTATATTCGCGGGTAAACAACTCGAAGACGGCCGTACTCTCAGTGATTA 538 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| ||| | ||| |||| || | || |||||||| Sbjct 537 CAACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGG 487 >seq97621 Length=3513 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || ||||| || ||||| | || || | || | || | Sbjct 3502 AATGCAGATATTTGTGAAGACATTGACCGGAAAGACCATTACTTTAGAGGTTGAGCCGTC 3443 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| ||||| ||| | || ||| ||| || ||||||||||| || ||||| ||||| Sbjct 3442 CGATACCATTGAGAATGTGAAAGCAAAAATCCAGGACAAAGAAGGCATTCCTCCGGATCA 3383 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || ||||| || | || || ||||| |||||||||| | | |||||||||| || Sbjct 3382 GCAGAGACTTATCTTCGCTGGAAAACAGCTCGAAGATGGCCGCACACTCAGCGACTACAA 3323 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| || || ||||||||||||| Sbjct 3322 TATCCAGAAAGAGTCAACCCTCCATCTGGTCCT 3290 >seq95232 Length=1676 Score = 102 bits (112), Expect = 8e-17 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | ||||| || ||||| || ||||| | ||||| | || | || | Sbjct 386 AAAATGCAGATCTTTGTGAAGACATTGACAGGAAAGACCATCACTCTAGAGGTCGAGCCT 327 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || ||||||||| | || || ||||||| ||||| || ||||| ||| Sbjct 326 TCGGATACCATCGAGAATGTGAAGGCAAAGATTCAGGACAANNNNNNNATTCCTCCGGAT 267 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || |||||| | || | | ||| |||||||||||||||| |||| | ||||| ||| Sbjct 266 CAGCAAAGATTGATATTTGCCGGAAAACAACTCGAAGATGGAAGAACTTTAAGCGATTAT 207 Query 26946 AACATTCAAAAAG 26958 ||||||||||||| Sbjct 206 AACATTCAAAAAG 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478030140819120