Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq38739 86.0 2e-11 >seq38739 Length=464 Score = 86.0 bits (94), Expect = 2e-11 Identities = 160/231 (69%), Gaps = 18/231 (8%) Strand=Plus/Plus Query 111314 TTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTG 111373 ||| ||| | | |||||||| |||| | ||||| ||| || ||||||||||||| || Sbjct 41 TTTGCCATTATTGACAACAAAACGAATCTTTTGGAGAGGAGTTCTCGAAGAACTTCTTTG 100 Query 111374 GTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAAT---GTAAAAATTTG 111430 |||||| |||||||| || || | |||||| | | | ||| | || ||||| || Sbjct 101 GTTTATCCGCGGAAGCACTGATTCCAATGAATT---ATCCAAACTTGGAGTGAAAATCTG 157 Query 111431 GGATGGAAATGGATCACGTGACTTTCTAGATTCAG--TTGG----TCTTGTCGACAACGA 111484 | | ||| || || || ||||| || ||| |||| || ||||| | Sbjct 158 GTCCGCAAACGGGTCCCGATCTTTTCTCGA--CAGTCTTGGGTTCACTGATCGAC----A 211 Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 |||||| ||| | ||||| ||||| || ||||| ||| | || ||||| || Sbjct 212 AGAAGGAGATTTAGGACCTGTTTATGGGTTTCAGTGGAGACATTTTGGCGC 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301588976934722