Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq97621 118 1e-21 seq71986 82.4 7e-11 >seq97621 Length=3513 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| ||||| || || | ||| | ||| ||||| || || || ||||| ||||| Sbjct 3274 GCCACCGCGTAAACGAAGGACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCT 3333 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || ||||| || || ||| |||| | | |||||| |||||||| Sbjct 3334 GAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGG 3393 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || ||||||||||| |||||| ||| || | | ||| | ||||||| | ||| | Sbjct 3394 AATGCCTTCTTTGTCCTGGATTTT-TGCTTTCACATTCTCAATGGTATCGGACGGCTCAA 3452 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| | || || || || |||||||| Sbjct 3453 CCTCTAAAGTAATGGTCTTTCCGGTCAATGTCTTCACAAATATCTGCAT 3501 >seq71986 Length=2235 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || || || || ||||| | || || || ||||||||||||||||| || Sbjct 486 GCCTCCTCTCAGCCGAAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACT 545 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| || || || || || ||| | || | | |||||| || ||||| Sbjct 546 GAGAGTACGGCCGTCTTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGG 605 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || || |||||||| ||| | | || ||| | | ||| | ||||| | | || | Sbjct 606 TATACCCTCTTTGTC-CTGAATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAA 664 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||||||| || | || || ||||| |||||||| Sbjct 665 CTTCAAGAGTGATGGTTTTACCCGTCAATGTCTTCACGAATATCTGCAT 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471389324192640