Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq64116 132 6e-26 >seq64116 Length=3934 Score = 132 bits (146), Expect = 6e-26 Identities = 229/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 32471 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 32530 || |||||| || | || |||||| || || |||| || ||||| ||||| | || Sbjct 3284 AACTCCCAACTCTTGGAGCAGTCTATCGGCCACGTATTCGATGTATGTCTTCATGAGATC 3225 Query 32531 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 32590 |||||||| || || || || || || | || | || ||||| || ||||||||| Sbjct 3224 GCAATTCATGCCAATCAGATTCACAGGCAATGCTTCCGTTAGAAACTCCTGTTCAATAAC 3165 Query 32591 GACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT 32650 ||||| ||| | | || ||| | || ||| ||| | | | ||| | Sbjct 3164 AACCGCTTCTTTCACTATTTGCAAAACTTTCTCCTCATATGGTTTGTTCTCAATGTGTCT 3105 Query 32651 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 32710 || | | ||| ||||||||||| || || || || || | | ||| | ||| || Sbjct 3104 GAATAGAAGACACGCGAAATCGCAATGAAGTCCTTCATCGCGAGAAATAAGTTCATTACT 3045 Query 32711 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 32770 ||||| | ||| ||||| || || |||||||||||||| |||||||| || || || || Sbjct 3044 GAACGTCAATCCAGGCATAAGTCCGCGCTTTTTAAGCCAGAATATGGAAGCGAAGGAACC 2985 Query 32771 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 | ||||||||||||||| |||| ||| || || Sbjct 2984 ACTAAAGAAAATTCCTTCGACTGACGCGAAAGC 2952 Score = 113 bits (124), Expect = 6e-20 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 33047 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 33106 |||||| || || || || || ||||| ||||| || ||||| || ||| |||||||| Sbjct 2562 ATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAAATG 2503 Query 33107 TTTTTCGTCTGGTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTT 33165 ||||| | | | ||| ||||||||||||| | | ||| | | ||| ||||||| Sbjct 2502 CTTTTCAT-TCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTCTT 2444 Query 33166 CCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAA 33225 | |||||||| || || ||||| || || |||||||| | ||| ||||| ||||| | Sbjct 2443 CTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTCGA 2384 Query 33226 TTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGTTC 33271 | ||||| | || || | ||||||| | ||| | |||||| Sbjct 2383 TCGGAAATACGACGAAACGCCTTGGATTCTCACGAAGAAGTGGTTC 2338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632795043411600