Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq71986 136 3e-27 seq97621 123 2e-23 >seq71986 Length=2235 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| ||||| || ||||| ||||| |||||| ||||||| | ||||| || || Sbjct 714 AATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGCGAG 655 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || ||| | ||| |||| | ||| |||||||| || || || || || | Sbjct 654 TGATACCATAGAGAATGTAAAGGCAAAGATTCAG-GACAAAGAGGGTATACCTCCCGATC 596 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | |||| || || || |||||| | ||||| | || ||| | | ||||||| Sbjct 595 AGCAGAGACTTATATTCGCGGGTAAACAACTCGAAGACGGCCGTACTCTCAGTGATTACA 536 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||||||||| || || ||||| || || |||| |||||||| Sbjct 535 ACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGG 487 >seq97621 Length=3513 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| |||||||| ||||| |||||||| || |||| || | || || ||| |||| Sbjct 3502 AATGCAGATATTTGTGAAGACATTGACCGGAAAGACCATTACTTTAGAGGTTGAGCCGTC 3443 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| |||| ||||||| ||||||||||| ||||| || || || Sbjct 3442 CGATACCATTGAGAATGTGAAAGCAAAAATCCAGGACAAAGAAGGCATTCCTCCGGATCA 3383 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | |||| || || || ||||| | ||||||| ||||| | |||| ||||| Sbjct 3382 GCAGAGACTTATCTTCGCTGGAAAACAGCTCGAAGATGGCCGCACACTCAGCGACTACAA 3323 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||| || || || ||| | || || Sbjct 3322 TATCCAGAAAGAGTCAACCCTCCATCTGGTCCT 3290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432769931899865