Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq71986 118 9e-22 seq97621 107 2e-18 >seq71986 Length=2235 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| ||||| | || ||||||||||||||||||||||| || | |||||| ||||| Sbjct 504 AACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTCTTC 563 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||||||||||| ||| | || || | ||| || || ||||| || || |||||||| Sbjct 564 GAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTCCTG 623 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||||| |||| | || | ||| || | | ||| || || | || | ||||| Sbjct 624 AATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACTTCAAGAGTGATGGTTTT 683 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || || || || |||||||| Sbjct 684 ACCCGTCAATGTCTTCACGAATATCTGCAT 713 >seq97621 Length=3513 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || || ||||| ||||| | || || |||||| || ||||| ||| Sbjct 3305 GTTGACTCTTTCTGGATATTGTAGTCGCTGAGTGTGCGGCCATCTTCGAGCTGTTTTCCA 3364 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| || ||||||||||||||||||||||| || ||| ||| Sbjct 3365 GCGAAGATAAGTCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTTTGCTTTC 3424 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| |||| | || || || | || | || || ||||||| || Sbjct 3425 ACATTCTCAATGGTATCGGACGGCTCAACCTCTAAAGTAATGGTCTTTCCGGTCAATGTC 3484 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 3485 TTCACAAATATCTGCAT 3501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419593323479652