Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq97621 145 2e-29 seq71986 125 2e-23 >seq97621 Length=3513 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| | | ||| || ||||| | || ||||| |||||||| |||||| | Sbjct 3275 CCACCGCGTAAACGAAGGACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCTG 3334 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | |||||||| |||||||| || | ||| ||| || Sbjct 3335 AGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGGA 3394 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||||||||| |||||||| || || || | |||| || || || Sbjct 3395 ATGCCTTCTTTGTCCTGGATTTTTGCTTTCACATTCTCAATGGTATCGGACGGCTCAACC 3454 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || ||||| ||||||| ||||| || |||||||||||| Sbjct 3455 TCTAAAGTAATGGTCTTTCCGGTCAATGTCTTCACAAATATCTGCATT 3502 >seq71986 Length=2235 Score = 125 bits (138), Expect = 2e-23 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || | ||||| || ||||||||| || || || || ||| || || ||||| Sbjct 501 AAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTC 560 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||| | |||||| || ||||| || || | ||| ||| || || || ||||| || Sbjct 561 TTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTC 620 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| || || || || || || ||||| | ||| |||| ||| ||||| || ||||| || Sbjct 621 CTGAATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACTTCAAGAGTGATGGT 680 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || |||| ||||| ||||||||||||||| || Sbjct 681 TTTACCCGTCAATGTCTTCACGAATATCTGCATTTTG 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178057254479938