Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq97621 131 2e-25 seq71986 95.1 1e-14 >seq97621 Length=3513 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||||||||| || | |||| ||| | || |||||||| || |||||||| ||| Sbjct 3272 GCGCCACCGCGTAAACGAAGGACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCG 3331 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| ||| || ||||||||||||||| |||| | || ||||||||| ||| Sbjct 3332 CTGAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGA 3391 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 || ||||| || |||||| |||||| ||| || | | || | ||| || | ||| Sbjct 3392 GGAATGCCTTCTTTGTCCTGGATTTT-TGCTTTCACATTCTCAATGGTATCGGACGGCTC 3450 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | || || ||||||| || || ||||| |||||||| Sbjct 3451 AACCTCTAAAGTAATGGTCTTTCCGGTCAATGTCTTCACAAATATCTGCAT 3501 >seq71986 Length=2235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || || ||||||||||| |||||||| | | || || || || Sbjct 505 ACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTCTTCG 564 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||||||||||||| ||||| |||||| || Sbjct 565 AGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTCC-TG 623 Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTC---TCGACTTCGACGGTCACCGT 127080 | | | || ||| | | || | ||| || |||| || ||||| | || | || Sbjct 624 AATCTTTGCCTTTACATTCTCTATGGTATC---ACTCGCTTCAACTTCAAGAGTGATGGT 680 Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || |||| || || || || |||||||| Sbjct 681 TTTACCCGTCAATGTCTTCACGAATATCTGCAT 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474872716937040