Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq97621 107 2e-18 seq95232 89.7 5e-13 >seq97621 Length=3513 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || ||||| || || |||||||| || ||||||| || ||| || Sbjct 3293 ACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCTGAGTGTGCGGCCATCTTCG 3352 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||||| ||| | || | || ||||| ||||| |||||||||||||| || || Sbjct 3353 AGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGG 3412 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | || | ||| ||||| | ||| || || | ||||| || || Sbjct 3413 ATTTTTGCTTTCACATTCTCAATGGTATCGGACGGCTCAACCTCTAAAGTAATGGTCTTT 3472 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || || ||||| || ||||| Sbjct 3473 CCGGTCAATGTCTTCACAAATATCTGCAT 3501 >seq95232 Length=1676 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 45153 TTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATC 45212 ||||| || ||||||||||| | ||| | ||| || | ||||||||| || ||||| Sbjct 196 TTTTGAATGTTATAATCGCTTAAAGTTCTTCCATCTTCGAGTTGTTTTCCGGCAAATATC 255 Query 45213 AATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT 45272 |||| |||||| ||||| ||||| || || ||||| ||| || | || Sbjct 256 AATCTTTGCTGATCCGGAGGAATNNNNNNNTTGTCCTGAATCTTTGCCTTCACATTCTCG 315 Query 45273 ACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 | ||| || |||| |||||| || ||||| | || || || || | || || ||||| Sbjct 316 ATGGTATCCGAAGGCTCGACCTCTAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAG 375 Query 45333 ATTTGCAT 45340 || ||||| Sbjct 376 ATCTGCAT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451406154623160