Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq71986 86.0 1e-11 >seq71986 Length=2235 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | |||||| ||| | ||| | || ||||| || || Sbjct 511 TGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTCTTCGAGTTGT 570 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || || | |||||| || ||| || || ||| |||||||||||| Sbjct 571 TTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTCCTGAATCTTT 630 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| || | | ||| || || | ||||| || |||||||| Sbjct 631 GCCTTTACATTCTCTATGGTATCACTCGCTTCAACTTCAAGAGTGATGGTTTTACCCGTC 690 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTTAGCC 199639 | || ||||| || || || |||||| ||| Sbjct 691 AATGTCTTCACGAATATCTG---CATTTTGGCC 720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177325446624957