Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq88999 152 4e-31 seq80910 136 3e-26 seq88396 125 5e-23 seq54261 104 2e-16 seq26265 100 2e-15 seq37125 98.7 7e-15 seq56826 96.9 3e-14 seq41211 96.9 3e-14 seq38870 91.5 1e-12 seq91583 86.0 5e-11 seq74238 86.0 5e-11 >seq88999 Length=1251 Score = 152 bits (168), Expect = 4e-31 Identities = 275/394 (70%), Gaps = 15/394 (4%) Strand=Plus/Plus Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 ||||||||||||||||| || || |||| ||| | || || |||||| |||| |||||| Sbjct 864 GCAGCAGTTGGTTCATTGATGATCCTCAGAACTTCCAGTCCTGCAATTTTTCCGGCATCT 923 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 |||||||| ||| ||||||| || ||||||||||| ||||| || || || || | ||| Sbjct 924 TTAGTGGCCTGTTTTTGTGAGTCATTAAAATATGCCGGAACTGTTATGACCGCTTTTGTT 983 Query 518312 ACTTCTTTACCAATATAAGCG-CTTGCCG---TTTGTTTCATTTTACTTAAAATCATTGA 518367 | ||||| || || || || ||| ||||||||||||| | | ||| | | Sbjct 984 A---CTTTA-CATCCCAAACGATTTTCCGATATTTGTTTCATTTTCTTGAGAATTTTAGC 1039 Query 518368 TGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACT-TCAAAATATG 518426 ||| |||| ||| || || || | | || | || |||| ||| | || || | Sbjct 1040 TGATATTTCTTCGGGACAAAATGTCATATCTTTACCTTTATATTTGACTCTGAATTTAGG 1099 Query 518427 GT--TTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT 518484 | ||||| || ||| || ||||||| | | ||| ||||||||| |||||| Sbjct 1100 ATTGTTATTGCCGTCATCAACAACTTTATAAGACCACAGTTTCATATCATTTTGAACTGA 1159 Query 518485 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGAT- 518543 | ||||| || | | |||||| | || |||||| ||||| |||||| ||||| Sbjct 1160 TGTATCATTGAATTGACGACCAATAAGTCTTTTTGCGAGAAAAAGAGTATTACGTGGATC 1219 Query 518544 -TAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576 ||| | ||||| | ||| || ||||||||| Sbjct 1220 ATAAAT--AGCTTCCTCTTTAGCCACATCTCCAA 1251 >seq80910 Length=732 Score = 136 bits (150), Expect = 3e-26 Identities = 175/234 (75%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || || ||||| | |||||| | | ||| ||| |||||| | ||||||| | || | Sbjct 22 GTACCTCCACCTAAATCAAAGACTAATACTTTCTCTTCTTTAT--TGGTTTTATTGAA-A 78 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATT-AATAATTCTCAAAACATTAAGACCAGC 518235 ||||| |||| ||||||||||||||||| || ||||| || | ||| | |||||| || Sbjct 79 CCATATGCAATTGCAGCAGCAGTTGGTTCGTTCAATAA-GCTAACAACTTCAAGACCGGC 137 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 |||| |||| |||||| ||||||| |||||||| |||| || ||||| || ||||| || Sbjct 138 AATTTTTCCAGCATCTCTAGTGGCCTGTCTTTGAGAATTATTGAAATAAGCTGGAACTGT 197 Query 518296 AATAACGGCATCAGTT-ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 ||| || || || || |||| | |||| ||| || |||| || ||||| Sbjct 198 AATCACCGC-TCTTTTGACTTTCTCTCCAAGATATGCTTCAGCCGCTTCTTTCA 250 >seq88396 Length=2800 Score = 125 bits (138), Expect = 5e-23 Identities = 178/250 (71%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 ||||| || |||| ||| || | | | ||| ||||| ||| ||||| || ||| Sbjct 2080 GTTCCGCCGCCCAAATCGAATACCAAAATATTTTTTTCTC---CTTCCTTTTTGTCGAGA 2136 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| || ||||| || ||||| |||||||| | || |||||| || ||||| Sbjct 2137 CCGTAAGCAATGGCTGCAGCGGTCGGTTCGTTAATAATACGCATAACATTGAGTCCAGCG 2196 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || || ||||||||||| |||| ||| | || || ||||| || ||||| || Sbjct 2197 ATAACACCGGCGTCTTTAGTGGCCTGTCGTTGAGCGTCATTGAAATAAGCGGGAACTGTG 2256 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 | ||| || | | || | |||||| | ||| || || |||| |||||||||| | Sbjct 2257 ACAACTGCGTGCGACACCTTTTTACCCAAATAGGCTTCAGCTGTTTCTTTCATTTTAATC 2316 Query 518357 AAAATCATTG 518366 |||| ||||| Sbjct 2317 AAAACCATTG 2326 Score = 93.3 bits (102), Expect = 3e-13 Identities = 188/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 |||||||| ||||| ||| |||| | ||||| || ||||||| ||| || | Sbjct 1423 GATTTTTTGGTTGGAATGACTGTATTTCGAGGAATAAGTTTAGTCATAACACCGCCAACA 1482 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 || || | ||| | || | ||| ||||||||| || || | | | | | || Sbjct 1483 GTCTCAATACCCATAGTTAACGGATTGACATCAAGTAAAACTAGTTCTCC---TGTGTCT 1539 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 || || || ||||| | || |||| |||||||| | |||||||||||||| Sbjct 1540 TC---TTCGCCGGAAAGAACTCCAGCCTGAACGGCAGCACCGAAAGCAACAGCTTCATCG 1596 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 ||||||| | | | ||| ||| |||||||| || | | || ||||||| ||| Sbjct 1597 GGATTAATACCACGAGTAGGTTCTTTTCCATTGAAGAATTCTTTAACAAGTTGTTGTACT 1656 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 || |||||||||| || || || |||||||| ||||| Sbjct 1657 TTTGGAATACGAGTCGAACCGCCGACTAATACTATTTC 1694 >seq54261 Length=2469 Score = 104 bits (114), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| | |||||| |||| |||||||| || |||||||| || | |||||| || ||| Sbjct 1470 TTATCCATACCATAAGCAATGGCAGCAGCTGTGGGTTCATTGATCACTCTCAACACGTTA 1529 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || || | || || |||||||||||||| |||||||| || || || ||||| || Sbjct 1530 AGCCCTGATATCTGACCAGCATCTTTAGTGGCCTGTCTTTGCGAGTCATTGAAATAAGCG 1589 Query 518288 GGAACAGTAATAACGGC 518304 ||||| || || || || Sbjct 1590 GGAACTGTTATGACCGC 1606 >seq26265 Length=220 Score = 100 bits (110), Expect = 2e-15 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 518183 GCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC-AAAACATTAAGACCAGCAATTCT 518241 |||| || |||||||| |||||||| || || ||| ||||| | ||| || || ||| | Sbjct 115 GCAATTGCCGCAGCAGTCGGTTCATTTATGAT-CTCTAAAACTTCAAGCCCTGCTATTTT 57 Query 518242 TCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||||||||||| ||||||||| |||| ||||| || |||||||| ||||| || Sbjct 56 ACCTGCATCTTTTGTGGCTTGTTTTTGCGAATCATTGAAATATGCGGGAACTGT 3 >seq37125 Length=2245 Score = 98.7 bits (108), Expect = 7e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 668858 AAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGTACA 668917 ||||||||||||||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct 1704 AAAGAAGGTCGTATTCGAGGAAATTTGATGGGAAAACGTGTCGACTTCTCTGCTCGTACT 1763 Query 668918 GTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATTGCT 668977 || ||||| | ||||| || | | |||| || || ||||| | | ||| ||| Sbjct 1764 GTCATTACACCCGATCCTAACTTAAGAATAGATGAGGTCGGAGTTCCGCGTTCTATAGCT 1823 Query 668978 AAAAATCTTACTTTTGACGAAATTGTAAC 669006 | ||| | || ||| ||||| || || Sbjct 1824 CAGAATTTAACCTTTCCTGAAATAGTCAC 1852 >seq56826 Length=357 Score = 96.9 bits (106), Expect = 3e-14 Identities = 164/234 (70%), Gaps = 13/234 (6%) Strand=Plus/Plus Query 518488 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA-- 518545 ||||||||||| ||| || || | |||||| |||| | || ||| | | ||| || Sbjct 39 GTCATTAAAATTTCTTCCTATCATTCGTTTCATATCATATATTGTAATCGCTGGGTTTTC 98 Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTT----CTGTCTCTGTAAATGA 518601 || | || || | ||| || | | ||||| || ||| | | ||||||||||||| Sbjct 99 ATAG--GCCTGCTCTTTAGCAGACTGTCCAA-CAAATGATTCACCACTCTCTGTAAATGA 155 Query 518602 AACATATGATGGAGTTGTGCGATTA--CCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | |||||| |||||||| | ||| || | ||| | ||||| | |||||| || Sbjct 156 TAAATATGAAGGAGTTGT--GTTTAATCCATACGTATTTGAGATAATATGAACTTTTCCT 213 Query 518660 TTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | | | ||||| ||||| ||| ||||||| |||||||| |||||||| ||| Sbjct 214 YTATTCATWACACCGACACARCTATAAGTTGTGCCTAAATCTATACCAATTGCA 267 >seq41211 Length=515 Score = 96.9 bits (106), Expect = 3e-14 Identities = 211/314 (67%), Gaps = 13/314 (4%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 || || || |||||||| || || ||||| |||||| | | | | | || ||| Sbjct 25 TGCACACTCATTTTGACTGAAGGCGATTCCGCTAAATCTCTAGTCGTTGCCGGACTTGGA 84 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | ||||||||| | || |||||||| ||| | ||||||||| | | ||||| || Sbjct 85 GTTGTCGGAAGAGATAAATACGGAGTTTTTCCATTAAGAGGAAAAATGCTTAATGTGAGA 144 Query 635561 GATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaa--aaaaTTG 635618 || || | | ||| ||||| || || | ||||| || ||| || ||||| Sbjct 145 GAAGCCACACATAAGCAAATTCTGGAAAACGCAGAAAT--CAATAATTTAATCAAAATAA 202 Query 635619 TTGGACTTGA--ACAAGGAAAAGT-------TTATGATGATCTCAAAGGTTTACGATATG 635669 | |||||| | |||| | || | | ||| ||||| ||| ||| || || | Sbjct 203 TGGGACTTCAGTACAAAAAGAATTACTCGACTCCTGAAGATCTGAAAACTTTGCGTTACG 262 Query 635670 GTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCA 635729 | || | ||||| | ||||||| ||| || || | ||||||||||| ||| ||| Sbjct 263 GAAGACTAATGATAATGACTGATCAGGATCAAGACGGCTCTCATATCAAAGGCTTACTCA 322 Query 635730 TGAATTTTATCCAT 635743 | |||||||| ||| Sbjct 323 TCAATTTTATTCAT 336 >seq38870 Length=839 Score = 91.5 bits (100), Expect = 1e-12 Identities = 110/147 (75%), Gaps = 11/147 (7%) Strand=Plus/Minus Query 517591 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 517650 |||||| |||||||||||||| ||| ||||||||||| |||||||| |||| | ||| Sbjct 462 AATAGCAGCTTGAATAGCAGCCCCAATAGCAACAGCTTCGTCAGGATTTACAGCATAATT 403 Query 517651 --TAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT--CTTACCTTAGGAATACGAG 517706 || |||| ||||| | | |||||| | |||| ||| | || ||||||| Sbjct 402 CAAAGGTTTT-----TTGAATAGGTCTGAAAGCATTTGTTGAATACGT--GGTATACGAG 350 Query 517707 ATGATCCTCCAACTAATACAATTTCAT 517733 |||||| || ||||||||||| |||| Sbjct 349 TTGATCCGCCGACTAATACAATGTCAT 323 >seq91583 Length=600 Score = 86.0 bits (94), Expect = 5e-11 Identities = 90/116 (78%), Gaps = 7/116 (6%) Strand=Plus/Minus Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || || |||||||| ||||| || |||||||| |||| ||| |||| || ||||| | Sbjct 591 TTTCCCTGATCATTAGCAATGATCTCAACTTTNCCATGTTGAAATACTCCAACACATGAA 532 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC---AATTTTATCTGACATTATTATTAT 518736 |||||||||| |||||||||||||| || || ||| || |||| ||||||| Sbjct 531 TAAGTTGTTCCCAAATCAATACCAATCGCGCAAACTTT---TGCCATT-TTATTAT 480 >seq74238 Length=2986 Score = 86.0 bits (94), Expect = 5e-11 Identities = 182/271 (67%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 517582 ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAAC 517641 |||| |||| || || ||||| || || |||||||| |||||||||||||| ||||||| Sbjct 263 ACCATCAAGGATTGCAGCTTGTATTGCTGCACCATAAGCAACAGCTTCATCTGGATTAAT 322 Query 517642 AGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAAT 517701 || || ||| || ||| || || ||| | | || |||| | | || ||||| Sbjct 323 AGATTTATTAAGAGGTTTTCCTTTAAAATATTCACTCAGCAGTTCTTGAATTTTTGGAAT 382 Query 517702 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 517761 || | ||| |||||||| | | || ||||| | | ||| |||| | | | ||| Sbjct 383 TCGTGTTGAGCCTCCAACCAGAATAACTTCATCAATATTGGATGGTTCCATTCTGGCATC 442 Query 517762 CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTC 517821 ||||| | ||| || |||| | | | ||| |||||| | || |||||| Sbjct 443 AAATAATGCCTTTGAGACCAGTTCCATAGTTTTTTCAAATAAGTCTTTATTAATTTCTTC 502 Query 517822 GAATTTAGCTCTAGTAAGAGTGACATTATAA 517852 ||| ||| || ||| | ||| |||| ||| Sbjct 503 AAATGTAGATCGAGTTAAAGT--CATTCTAA 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3775578656899726