Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq101090 100 4e-16 >seq101090 Length=3278 Score = 100 bits (110), Expect = 4e-16 Identities = 187/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 13722 AATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCATGAATCA 13781 || || |||||| |||| | |||||| | || || || ||||| |||||||| Sbjct 68 AACTATCGCGAGGCTTATAATATATTTGCAGTCAATGGTATTCTATTCAATCATGAATCT 127 Query 13782 CCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACC-GAGG-GTATCAAACAAATCA 13839 ||| || |||| | | ||||| || | ||| || | | || || | || | | | Sbjct 128 CCGCGAAGAGGAGAAACTTTTGTCACGAGGAAAATAAGCAGATCTGTGGCTAAGATCTTA 187 Query 13840 TGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATTGGGGTC 13899 | || |||| ||| | ||||||| || ||| || |||| || | |||||||||| Sbjct 188 TTAAA--TGAATTGGAATATTTTGAATTAGGAAACTTAGACGCAAAGCGTGATTGGGGTC 245 Query 13900 ACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGACGAAT 13959 |||| | |||||||| ||||| |||||||||||||||||||| || | | || || | Sbjct 246 ACGCCAGAGACTATGTCGAAGCGATGTGGCTCATGCTTCAACAGGATACACCTGAAGACT 305 Query 13960 ATGTAGTAGCAACGGGTGAGACCCATTCAGT 13990 |||| || | || || || | ||||| || Sbjct 306 ATGTTATATCCACCGGAGAATCTCATTCTGT 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619922469123120