Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq64116 125 8e-24 >seq64116 Length=3934 Score = 125 bits (138), Expect = 8e-24 Identities = 147/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| |||||| ||||| || ||||| || || ||||| ||||| || || ||| ||| Sbjct 2567 ACCAGATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATA 2508 Query 19405 AAATGTTTTTCAT-CTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTA 19462 ||||| ||||||| || | |||| | |||||||||| | | ||| | | ||||| Sbjct 2507 AAATGCTTTTCATTCTTA--TTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTA 2450 Query 19463 CTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGAT 19522 ||||||| |||||||| || || ||||| ||||| |||||||| | ||| || || || Sbjct 2449 CTTCTTCTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTAT 2390 Query 19523 ATTGTATAGGAAATA 19537 ||| || ||||||| Sbjct 2389 ATTCGATCGGAAATA 2375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561366317512440