Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq65162 86.0 7e-12 >seq65162 Length=5716 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCG 139307 || ||| | | || ||| | || || |||||| ||||| | | || |||||| || Sbjct 2522 GCGATATCTTTTAATCCTTTTGGTCCGTGATATATGGCATACATTGCACTCATATTAGCC 2463 Query 139308 AGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCT 139367 | | |||||| |||||||| || ||| ||||| || |||||||| || ||||| ||| Sbjct 2462 AATAATGCTTGAGCTGTGCATATATTAGAAGTTGCCTTATCTCTTCTTATGTGCTGTTCT 2403 Query 139368 CTAGTTTGTAGTGCTAATCT 139387 ||||||||||| || | ||| Sbjct 2402 CTAGTTTGTAGAGCAAGTCT 2383 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139858 GCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATC 139917 |||| ||||| || || || ||| | ||||||| ||| || ||||| || ||| | Sbjct 1793 GCATCGCCTCCGCAGCGGCCGTTCCCTCATCTAGAAGACTAGCATTTGCGATGTCTAAAC 1734 Query 139918 CTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATA 139977 |||| | || | || | ||||||||||||| | | ||||| ||||||||| | || Sbjct 1733 CTGTCAACTCAGAAATCATAGTTTGGTAATTGAGCAGTGATTCCAGTCTTCCCTGCGCTA 1674 Query 139978 TCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAAC 140013 | || || ||||| |||||||| | ||| ||||| Sbjct 1673 TTTCTGCCTGATATGGAGTGTATGGTGTTGTCCAAC 1638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578233608250920