Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq101090 111 2e-19 >seq101090 Length=3278 Score = 111 bits (122), Expect = 2e-19 Identities = 221/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 47758 TCAACAAACTGACGGACAGAATATTGATT-TCCTGTGGCAATAACAAAATCATCAGGTTC 47816 |||||||| | |||||||| |||| ||| |||| |||||| | || |||||| Sbjct 351 TCAACAAATTCTTTGACAGAATGA-GATTCTCCGGTGGATATAACATAGTCTTCAGGTGT 293 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || ||||||||||| | |||||| || |||||||| |||||||| || ||||| ||||| Sbjct 292 ATCCTGTTGAAGCATGAGCCACATCGCTTCGACATAGTCTCTGGCGTGACCCCAATCACG 233 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTT--TT 47934 ||| || | ||||||| | ||| | || | | | |||| ||| Sbjct 232 CTTTGCGTCTAAGTTTCCTAATTCAAAATATTCCAATTCATTTAATAAGAT--CTTAGCC 175 Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994 | | ||| | || || | || ||||||||||| || | || |||||||||||||| Sbjct 174 ACAGATCTGCTTATTTTCCTCGTGACAAAAGTTTCTCCTCTTCGCGGAGATTCATGATTG 115 Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054 || ||||||||| | ||| | || || | || |||||||| || ||||| Sbjct 114 AATAGAATACCATTGACTGCAAATATATTATAAGCCTCGCGATAGTTAACAACAATCCAA 55 Query 48055 TACCCATAGAGTTTTGCAACACC 48077 || ||||| | ||| || || || Sbjct 54 TAGCCATACAATTTAGCGACGCC 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664615356765720