Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq85416 127 6e-24 >seq85416 Length=4944 Score = 127 bits (140), Expect = 6e-24 Identities = 224/324 (69%), Gaps = 2/324 (1%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 || ||| | || || ||||| ||||| |||||||| | | ||| || | || | || Sbjct 4358 CTCTTTCTGCCGACGGCATCGATTTCATCAATGAATAGAATACAGGGTGCGTTCTTTCGT 4417 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || ||||| || | ||||| || | || | || | ||| ||| ||||||| | || Sbjct 4418 GCCATTGCGAACATGTCTCTAACTCTTGAAGGGCCGACACCGACAAACATTTCGAGGAAC 4477 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 |||||| | |||||| |||||| | ||| || || || || || |||| |||| || Sbjct 4478 TCAGAACCCGATACTGTAATGAAGGGTACGTTCGCCTCACCAGCGGTTGCCTTCGCGAGC 4537 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 ||||| || || ||||| || || || ||||| |||||||||||| ||| || || Sbjct 4538 AGTGTTTTGCCAGTTCCGGGCGGACCAGTCAATAGCGCTCCCTTTGGTATTTTCGCGCC- 4596 Query 289261 GCAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTT 289319 | || | |||| || ||| | ||||| || | ||| | |||| || || ||| Sbjct 4597 TAAATCTAAGTATTGCTGAGGATTTTTTAAGAAGTTTACGAATTCCATAATCTCTACTTT 4656 Query 289320 TGCCTCATCACATCCTGCTACATC 289343 ||| || ||||| || || ||||| Sbjct 4657 TGCTTCTTCACAACCGGCAACATC 4680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469824891893127