Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq71986 105 6e-18 >seq71986 Length=2235 Score = 105 bits (116), Expect = 6e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || |||||||| || || || ||||| ||||| | Sbjct 713 ATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGCGAGT 654 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||| | ||||| |||||| || |||||||| || |||||||||||||| Sbjct 653 GATACCATAGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATACCTCCCGATCAG 594 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881 || | | || || || || ||||| || || || || | ||| ||||| | Sbjct 593 CAGAGACTTATATTCGCGGGTAAACAACTCGAAGA--CGGCCGTACTCTCAGTGATTACA 536 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||||||||| ||||| || || || ||||| | || || | ||||||| Sbjct 535 ACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGGCG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449303335883880