Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq36511 105 1e-16 >seq36511 Length=4397 Score = 105 bits (116), Expect = 1e-16 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||| || ||| |||||| || || ||| Sbjct 2465 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACAGCATGCTTGGCCAACTCTCCAGGCA 2524 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || || || |||||||| || || ||| || ||||||||| | Sbjct 2525 AAAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTGATGGTCGAGCGCTTGTTGTAGT 2584 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || || |||| | || || |||| || || || ||||| ||||| Sbjct 2585 GAGCTAGACGAGACGCTTCGGCAGCAATTCGCTCGAAAATATCATTTACAAAGCTGTTCA 2644 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| || || || || ||| || || ||||||||||| ||||||| Sbjct 2645 TTATGCTCATCGCCTTCGACGAAATTCCGGTGTCAGGATGGACCTGCTTGAGAACCTTGT 2704 Query 1485710 AAA 1485712 ||| Sbjct 2705 AAA 2707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7905005693764569