Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq71986 141 9e-29 seq97621 123 2e-23 seq102572 87.8 2e-12 >seq71986 Length=2235 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||||| | || | ||| ||||||| || ||||||||||| ||||||||||| || Sbjct 486 GCCTCCTCTCAGCCGAAGAACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACT 545 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | |||||||||||||||||| || | || || | |||||||||||||| Sbjct 546 GAGAGTACGGCCGTCTTCGAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGG 605 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||| || |||||||| ||| ||| |||| | || | || || | | ||| || Sbjct 606 TATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAAC 665 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| ||| | || || || |||||||| || |||||||| ||||| Sbjct 666 TTCAAGAGTGATGGTTTTACCCGTCAATGTCTTCACGAATATCTGCAT 713 >seq97621 Length=3513 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || |||||||| | || | ||| | || || ||||| || || ||||| ||||| Sbjct 3274 GCCACCGCGTAAACGAAGGACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCT 3333 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | ||||| |||||||| ||||| ||||| |||| || | |||||||| ||||| Sbjct 3334 GAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGG 3393 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||||||||| |||||| ||| | | || | || || | || || || Sbjct 3394 AATGCCTTCTTTGTCCTGGATTTTTGCTTTCACATTCTCAATGGTATCGGACGGCTCAAC 3453 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| ||||||||||| || || ||||| ||||| Sbjct 3454 CTCTAAAGTAATGGTCTTTCCGGTCAATGTCTTCACAAATATCTGCAT 3501 >seq102572 Length=1560 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/122 (74%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | ||| ||||||| || || |||||||| || |||||||| Sbjct 1439 CCTCCGCGAAGACGGAGAACCAAATGAAGWGTTGACTCTTTTTGWATRTTGTAATCRSWA 1498 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||| |||||||| || ||| | |||| | ||||||||| ||||| Sbjct 1499 AGAGTGCGGCCGTCTTCCAGTTGTTTGCCCGCAAAAATCAATCTTTGCTGATCCGGAGGA 1558 Query 137305 AT 137306 || Sbjct 1559 AT 1560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487898688337200