Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq93292 206 5e-48 >seq93292 Length=5156 Score = 206 bits (228), Expect = 5e-48 Identities = 324/458 (71%), Gaps = 8/458 (2%) Strand=Plus/Plus Query 182855 TTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAATAAACATTACGATAGTGTTC 182914 |||| | |||||| || | |||||||||||||| |||||| || |||| |||| | Sbjct 989 TTGTTCGCAGAGAATTAGCCGATAATTTTTGTTATTATAATGAAAATTATGATAAATTGG 1048 Query 182915 AGTCTACTCACGCATGGGCTAGAAGAACATTAGAAGATCACGTTAATGATCCTAGAAAGT 182974 || | | | | |||||| ||| ||||||| | |||||| || || ||| ||| Sbjct 1049 AGGGCAGTTATGAATGGGCACGAAAAACATTAAATGATCACAAAAAAGACAAAAGAGAGT 1108 Query 182975 ATATCTATTCTATTAAACAACTCGAAAAGG--CAGAAACAC-ATGACCCTCTATGGAATG 183031 || | ||| | | || | | ||||| | | || ||| ||||| ||||||||| Sbjct 1109 ATTTGTATAGTTTGGAAGAGTTTGAAAAAGGTCTGACTCACGATGACT---TATGGAATG 1165 Query 183032 CATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGG 183091 | | || ||||| ||| | ||||| |||||||||||| | ||| | || ||||| |||| Sbjct 1166 CGGCGCAGATACAAATGGTTAGAGACGGAAAAATGCATGGATTTCTCCGTATGTATTGGG 1225 Query 183092 CTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTAT 183150 | || || ||||| || ||||| | | || ||| | || || || || | ||| ||| Sbjct 1226 CAAAGAAAATACTGGAGTGGACCGAATCACCCGAACAAGCGTTAGAATT-TGCTATTTAT 1284 Query 183151 ATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGG 183210 | || |||| |||||| | || || | ||||| ||||||||||| |||||||||||| Sbjct 1285 TTAAATGATAAATACGAATTGGATGGAAGAGATCCGAACGGATACGTCGGTTGTATGTGG 1344 Query 183211 TCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGA 183270 ||||| || || | |||||| | |||||||| || ||| | |||||||| ||| | Sbjct 1345 TCTATATGTGGTGTTCACGATCAGGGATGGAAAGAGAGGCCTGTCTTTGGAAAAATACGT 1404 Query 183271 TATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 183308 | |||||| ||| | | | ||| ||||| ||||| Sbjct 1405 TTTATGAACTATAATGGATGTAAACGTAAATTCGATGT 1442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902217895438560