Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq56172 129 8e-25 >seq56172 Length=3950 Score = 129 bits (142), Expect = 8e-25 Identities = 290/436 (67%), Gaps = 0/436 (0%) Strand=Plus/Plus Query 140356 AAAAGAAAAAGTTAACTCAAAGCGAGGCGATGACAATTTTCTTTAAAGTTGCTAAGATTG 140415 || |||||||||| | |||| || ||| || || |||| | | || | | ||||| Sbjct 1206 AAGAGAAAAAGTTGCCCGAAAGGGAAGCGTTGCGTATATTCTATGATGTGGTGAGGATTG 1265 Query 140416 TTTTGTCGCTACACACAAATAATATTGTTCACCGAGACATTAAACTCGGAAACATCATTT 140475 | | |||| | | |||| |||||| |||| ||||||||||||| || | | Sbjct 1266 TATGCAATTTACATAAGCGTCATATCGTTCACAGAGATCTTAAACTCGGAAATATGGTCT 1325 Query 140476 ATGACACAAAGTTAAAAACTAGTAAACTATCTAATTTTTGTTTAGGAAAACACCTTTCAA 140535 | | ||| | || || || |||||||||||||||||| || | | | Sbjct 1326 TCAATAAGAAGACCAGAAAAGTTACTTTAATTAATTTTTGTTTAGGAAAGCATTTGTTGA 1385 Query 140536 GTGAAAACGATCTTTTAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTA 140595 |||||| ||| | |||| ||||| | || |||||| ||||| ||| ||||| Sbjct 1386 ATGAAAATGATTTGTTAACTGATCAGAGAGGAAGTCCCGCGTATATCAGTCCTGATGTCT 1445 Query 140596 TCAGCGGTAAACCATATTTAGGTAAACCGTCTGATATGTGGGCGCTTGGAGTAACATTGT 140655 | |||||||||||||||||||| ||||| || ||| ||||| | || || |||| Sbjct 1446 TGAGCGGTAAACCATATTTAGGCAAACCTTCCGATTGTTGGGCTTTAGGGGTTGTTTTGT 1505 Query 140656 ATACCATGTTGTTTGGGCAATTTCCATTTTATGATGCGTCTCCAACAGAGCTCTTTAGAA 140715 ||| ||| | || || || ||||| || |||||| | || |||| | || |||| Sbjct 1506 TTACTATGCTTTTCGGTCAGTTTCCTTTCTATGATTCTGTGCCTCAAGAGTTGTTCAGAA 1565 Query 140716 AAATAAAGTCAGGCGTATTTACAATACCAACAGACATCAACGTTGATCTAAAAATAGAAA 140775 ||||||| || | | || | | | |||| ||| | |||| | || | ||||| Sbjct 1566 AAATAAAATCTGCGGAATATTCTGTGCCAAAAGATAGTCGCGTTTCACCCAATACAGAAA 1625 Query 140776 AATTAATCCAAAACTT 140791 | |||| ||||| || Sbjct 1626 CAATAATACAAAAGTT 1641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703651725915120