Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq15138 141 2e-29 seq9884 93.3 1e-14 >seq15138 Length=312 Score = 141 bits (156), Expect = 2e-29 Identities = 185/250 (74%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 18442 GGCACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGA 18501 |||| ||||| ||||||||||||||||||| |||| ||| |||||||||||||||| Sbjct 312 GGCATGTCGTGCAGCGCCTCTTCCATCGCCGGATCCGACAGGCCGAACCATTGCTGCAAG 253 Query 18502 AAGTGGATGCGCAGCATCGTTTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGAC---C 18558 |||| || ||||||||||| |||| | |||||| || ||||| |||| | | Sbjct 252 TAGTGAATTCGCAGCATCGTCTCGATCGAGAACGGCGGACGTCCCGT---CTTGGCACGC 196 Query 18559 GGCGCATGCGGCGCTATCAACGCCAAAAACGCCTGCCACGGCACCA-CACGTTCCATCTC 18617 || ||||||||| | | | | ||| || || ||| ||||||| || ||||| |||| Sbjct 195 GGTGCATGCGGCTCCACGACCTCCACAAGTGCTGCCCAGGGCACCACCAGGTTCC-TCTC 137 Query 18618 ATCCAGAAATACCTGCTTGCGCG--TGCGTCGGTTGCTCAGGTCCAGGCCAAGGTCGCTT 18675 |||||||| | ||||||||| | | ||| | ||||| |||||| ||| || | Sbjct 136 GTCCAGAAACTCGCGCTTGCGCGTCTTCTTCG--TCGACAGGTTCAGGCCCAGGCCGAGT 79 Query 18676 TGTTTCATGG 18685 || ||||||| Sbjct 78 TGCTTCATGG 69 >seq9884 Length=287 Score = 93.3 bits (102), Expect = 1e-14 Identities = 119/161 (74%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 17747 CGCGCATCATCCATAGATTGCTCAGGGCAAACAACGTATGTAACTGCTGCGTGTTCTTCA 17806 ||||| |||||| ||||| ||| ||||||| ||| | |||| ||||||||| Sbjct 280 CGCGC--CATCCACAGATTCGACAGCGCAAACAGCGTCACGATCTGCGCTGTGTTCTTCG 223 Query 17807 CCAAGCCTCGATAGCGCACCTTCA--AATGCCCGAACTGGCGCTTGATGACCCGGAACGG 17864 |||| || |||||||| | ||||| ||| ||||||||||| |||||||| || ||||| Sbjct 222 CCAACCCGCGATAGCGAAGCTTCACGAAT--CCGAACTGGCGTTTGATGACACGAAACGG 165 Query 17865 ATGTTCTACGCGAGCACGAATGCGCGCCTTGACCCGCTCCA 17905 || || || ||||| |||| ||||| | | ||||| Sbjct 164 GTGCTCGACTTTGGCACGGATGCTGGCCTTCATCTTCTCCA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127724324637928