Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq97621 116 4e-21 seq71986 104 2e-17 >seq97621 Length=3513 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | |||||||||| || || ||||||||||| | || || ||||||| Sbjct 3293 ACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCTGAGTGTGCGGCCATCTTCG 3352 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 |||||||| || | |||| || | ||| ||||| ||||| ||||||||||| || Sbjct 3353 AGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGG 3412 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 |||||| ||||| | || | ||||||| |||||| || || | || | || || Sbjct 3413 ATTTTTGCTTTCACATTCTCAATGGTATCGGACGGCTCAACCTCTAAAGTAATGGTCTTT 3472 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || || | || |||||||| Sbjct 3473 CCGGTCAATGTCTTCACAAATATCTGCAT 3501 >seq71986 Length=2235 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | |||| ||||||||||||||||| || || | ||||| ||||| Sbjct 504 AACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTCTTC 563 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||| |||||||| | | || || | ||| ||||| |||||||| || ||||| || Sbjct 564 GAGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTCCTG 623 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| ||| || | | || | ||||| ||| || ||||| | || | ||||| Sbjct 624 AATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACTTCAAGAGTGATGGTTTT 683 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| |||| || || | ||| |||||||| Sbjct 684 ACCCGTCAATGTCTTCACGAATATCTGCAT 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475981650223560