Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq71986 156 4e-33 seq95232 102 7e-17 >seq71986 Length=2235 Score = 156 bits (172), Expect = 4e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || || || ||||| || || ||| | ||||| | ||||| ||||| Sbjct 717 CAAAATGCAGATATTCGTGAAGACATTGACGGGTAAAACCATCACTCTTGAAGTTGAAGC 658 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || ||| | ||||| ||| ||| || |||||||||||||| ||||| Sbjct 657 GAGTGATACCATAGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATACCTCCCGA 598 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| ||||| || | || || |||||||||||||| | | | | |||| ||||| Sbjct 597 TCAGCAGAGACTTATATTCGCGGGTAAACAACTCGAAGACGGCCGTACTCTCAGTGATTA 538 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| |||||||||||||| || ||||||| || | | |||||||||| Sbjct 537 CAACATTCAAAAAGAATCAACTCTTCATTTGGTTCTTCGGCTGAGAGGAGG 487 >seq95232 Length=1676 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||||| | ||||| || ||||| || ||||| | ||||| | || ||||| ||| Sbjct 386 AAAATGCAGATCTTTGTGAAGACATTGACAGGAAAGACCATCACTCTAGAGGTCGA-GCC 328 Query 25232 AACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || |||| |||||| | || || ||| ||| || || || || || || Sbjct 327 TTCGGATACCATCGAGAATGTGAAGGCAAAGATTCAGGACAANNNNNNNATTCCTCCGGA 268 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||||||| | || | | ||| |||||||||||||||| |||| | | |||||||| Sbjct 267 TCAGCAAAGATTGATATTTGCCGGAAAACAACTCGAAGATGGAAGAACTTTAAGCGATTA 208 Query 25351 CAATATTCAAAAAG 25364 || |||||||||| Sbjct 207 TAACATTCAAAAAG 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444506480370720