Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq71986 114 1e-20 seq93292 96.9 3e-15 seq97621 87.8 2e-12 seq95232 86.0 6e-12 >seq71986 Length=2235 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || || ||||||||||||||||| | || || |||| || Sbjct 505 ACCAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCACTGAGAGTACGGCCGTCTTCG 564 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || |||||||| ||||| | | |||||| || | ||| | | ||| |||||| Sbjct 565 AGTTGTTTACCCGCGAATATAAGTCTCTGCTGATCGGGAGGTATACCCTCTTTGTCCTGA 624 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||| | | | | | || || |||| ||| || || | ||||| |||||| Sbjct 625 ATCTTTGCCTTTACATTCTCTATGGTATCACTCGCTTCAACTTCAAGAGTGATGGTTTTA 684 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||||||| || ||||| |||||||||||| || Sbjct 685 CCCGTCAATGTCTTCACGAATATCTGCATTTTG 717 >seq93292 Length=5156 Score = 96.9 bits (106), Expect = 3e-15 Identities = 185/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 44130 TTGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCGT 44189 || ||||| || || || | |||| || | |||| || |||||||| || | ||| Sbjct 1156 TTATGGAATGCGGCGCAGATACAAATGGTTAGAGACGGAAAAATGCATGGATTTCTCCGT 1215 Query 44190 ATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTTCAT 44249 ||||||||| ||||| ||| |||||||| | ||| | || ||| | | | Sbjct 1216 ATGTATTGGGCAAAGAAAATACTGGAGTGGACCGAATCACCCGAACAAGCGTTAGAATTT 1275 Query 44250 GCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGGA 44309 || || ||| | || || || ||| ||||| || | || || ||||| ||||| || Sbjct 1276 GCTATTTATTTAAATGATAAATACGAATTGGATGGAAGAGATCCGAACGGATACGTCGGT 1335 Query 44310 TGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCTACGG 44368 ||||||||||| || || ||||| ||||| ||||| ||| |||| || ||| || Sbjct 1336 TGTATGTGGTCTATATGTGGTGTTCACGATCAGGG-ATGGAAAGAGAGGCCTGTCTTTGG 1394 Query 44369 CAAAGTGCGCTACATGAACTACAACGGTTG 44398 ||| | || | |||||||| || || || Sbjct 1395 AAAAATACGTTTTATGAACTATAATGGATG 1424 >seq97621 Length=3513 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| ||||| | | |||| ||| | || ||| || || || ||||| ||| Sbjct 3275 CCACCGCGTAAACGAAGGACCAGATGGAGGGTTGACTCTTTCTGGATATTGTAGTCGCTG 3334 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || || || || | | |||||| |||| |||| Sbjct 3335 AGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAGATAAGTCTCTGCTGATCCGGAGGA 3394 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || || |||||| ||| |||||||| || | | | | || ||| || || || Sbjct 3395 ATGCCTTCTTTGTCCTGGAT-TTTTGCTTTCACATTCTCAATGGTATCGGACGGCTCAAC 3453 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||| | || || || || || ||||| || ||||||||||||||||||| Sbjct 3454 CTCTAAAGTAATGGTCTTTCCGGTCAATGTCTTCACAAATATCTGCATTC 3503 >seq95232 Length=1676 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/189 (69%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 ||||||||||| |||||| || |||| | || || || || || || ||||||||| Sbjct 196 TTTTGAATGTTATAATCGCTTAAAGTTCTTCCATCTTCGAGTTGTTTTCCGGCAAATATC 255 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 || | ||||| |||| ||||| |||||| |||||| ||||| | | | Sbjct 256 AATCTTTGCTGATCCGGAGGAATNNNNNNNTTGTCCTGAATCTTTGCCTTCACATTCTCG 315 Query 35669 ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAAT 35728 | || || | || ||||| | ||||| || || || ||||| || |||||||| Sbjct 316 ATGGTATCCGAAGGCTCGACCTCTAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAG 375 Query 35729 ATCTGCATT 35737 ||||||||| Sbjct 376 ATCTGCATT 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450198152368680