Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq101090 109 8e-19 >seq101090 Length=3278 Score = 109 bits (120), Expect = 8e-19 Identities = 222/325 (68%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 161402 GGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATG 161461 ||||| |||||| | ||||| ||||||||||| ||||| | ||| |||| || Sbjct 32 GGCGTCGCTAAATTGTATGGCTATTGGATTGTTGTTAACTATCGCGAGGCTTATAATATA 91 Query 161462 CACGCCAGT-AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGT 161520 || ||| | ||||||||||||||| ||||| || || ||| | || || ||||| || Sbjct 92 TTTGC-AGTCAATGGTATTCTATTCAATCATGAATCTCCGCGAAGAGGAGAAACTTTTGT 150 Query 161521 AACCCGTAAGATTACTAG----GGGACTATCCCGTATTAGTACAGGACTACAGGATTGTC 161576 || | || || | || | | ||| | ||| || | || | ||| | | Sbjct 151 CACGAGGAAAATAAGCAGATCTGTGGCTAAGA--TCTTATTAAATGAATT--GGAATATT 206 Query 161577 TATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGG 161636 | | |||| || || || ||| || ||||||||||| || ||||||||| || | Sbjct 207 TTGAATTAGGAAACTTAGACGCAAAGCGTGATTGGGGTCACGCCAGAGACTATGTCGAAG 266 Query 161637 CTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAG 161696 | |||||| | ||| | |||||||| || ||||| |||||||| || |||| || || Sbjct 267 CGATGTGGCTCATGCTTCAACAGGATACACCTGAAGACTATGTTATATCCACCGGAGAAT 326 Query 161697 AGTATTCAGTGAAGGACTTTGTAGA 161721 |||| || || || ||||| || Sbjct 327 CTCATTCTGTCAAAGAATTTGTTGA 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728965445115480