Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq64116 102 1e-16 >seq64116 Length=3934 Score = 102 bits (112), Expect = 1e-16 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||| |||||| || || || ||||| || |||||||| |||||||| || ||| |||| Sbjct 2566 CCAGATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAA 2507 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 ||| ||||||| | | ||||||||| || | | ||| | | |||||||| Sbjct 2506 AATGCTTTTCATTCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTT 2447 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 |||| ||||||| || || ||||| || || || ||||| | ||| || || ||||| Sbjct 2446 CTTCTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATT 2387 Query 40179 GTATTGGAAAAATAACAAATCTATTTGGATT 40209 || ||||| | || || | ||||||| Sbjct 2386 CGATCGGAAATACGACGAAACGCCTTGGATT 2356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686001470752440