Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq64116 116 3e-21 >seq64116 Length=3934 Score = 116 bits (128), Expect = 3e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || ||||| ||||| || ||||| ||||| ||||| ||||| || ||||| |||| Sbjct 2368 TTCGTCGTATTTCCGATCGAATATACGGACATTTGGCAGATGTATAAGAAAGCTGAGGCC 2427 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCA-TT 43818 || || ||||||| ||||||||| ||| | | ||||||| |||||| | | || Sbjct 2428 TCCTTCTGGACAGTAGAAGAAGTAGATCTCGGGAGAGACTTAAGCGATTGGAATAAACTT 2487 Query 43819 AAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGG 43878 || | | | ||||| ||||||||||| || ||||| || ||||| || ||||| || Sbjct 2488 AATAAGA-ATGAAAAGCATTTTATATCACACGTGTTGGCATTCTTTGCCGCCAGCGATGG 2546 Query 43879 GATAGTCAATGAAAATTTGGT 43899 ||| || || |||||| |||| Sbjct 2547 GATTGTTAACGAAAATCTGGT 2567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396944130204355