Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq21474 107 5e-19 >seq21474 Length=1168 Score = 107 bits (118), Expect = 5e-19 Identities = 220/326 (67%), Gaps = 1/326 (0%) Strand=Plus/Plus Query 9159 TTGCGCAGGTACGCGTTCACGCCTTCAATCACGTCATTGACGTATTGTTTGGTGATGCCA 9218 |||| |||||| | ||||| |||||||| || |||| | ||| ||| || || Sbjct 526 TTGC-CAGGTAGGAATTCACCCCTTCAATAACATCATCCATGTAGGTTTTAGTAATATTG 584 Query 9219 CGGTCTACGGCCCACAGGTGTGCACGCAGCAGACTGTCATTGATGATGTCAGCCGTGCGA 9278 || || || ||||||| || ||||| | |||||||| || |||| || || || || Sbjct 585 CGATCAACTGCCCACAAATGAGCACGTAAAAGACTGTCGTTAATGAAATCTGCAGTACGC 644 Query 9279 ACCACGCACAGGAACGCCCATTTCTGATCGCTGGAACAGGTGCGGTTGCCCCACAGGCGG 9338 || | | || ||||||||| ||| || || ||||| | || ||||| || | | Sbjct 645 CTAACTGATAAAAATGCCCATTTCGAATCACTTGAGCAGGTTCAATTTCCCCAGAGTCTG 704 Query 9339 AAACCGTCCTGGCGAATGATGGTGGTGACTTCGTTTTCATTCAGCAGGTTTGCACGGCTG 9398 |||| | || |||| || || | ||||| ||||| || | ||||| | || | Sbjct 705 TAACCTTTTTGATGAATAATTGTTGCAACTTCATTTTCGTTTAAGTAATTTGCTCTGCAG 764 Query 9399 GATGTGTCACCCAGGGTGAAATCAATGGTTCGGGCCGTGCCCTGGATGCCATAGATTTCC 9458 || ||||| || || ||||||| | | | || || || |||| || ||| Sbjct 765 CTTGGATCACCAAGAGTAAAATCAACAGGCCTGCTAGTACCAACAATCCCATTAATCTCC 824 Query 9459 TGGTTTGATGGTGACCACCAGAAACC 9484 || ||||| |||||||||||||| || Sbjct 825 TGATTTGAAGGTGACCACCAGAAGCC 850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133042442849256