Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq101090 98.7 1e-15 >seq101090 Length=3278 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 9321 GGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATT 9380 || || || ||||| |||||||| ||| || |||| | | ||||| || | ||| || Sbjct 104 GGTATTCTATTCAATCATGAATCTCCGCGAAGAGGAGAAACTTTTGTCACGAGGAAAATA 163 Query 9381 ACC-GAGG-GTATCAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACA 9438 | | || || | || | | || || |||| ||| | ||||||| || ||| Sbjct 164 AGCAGATCTGTGGCTAAGATCTTATTAAA--TGAATTGGAATATTTTGAATTAGGAAACT 221 Query 9439 TAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGC 9498 || |||| || | |||||||||||||| | |||||||| ||||| ||||||||||||| Sbjct 222 TAGACGCAAAGCGTGATTGGGGTCACGCCAGAGACTATGTCGAAGCGATGTGGCTCATGC 281 Query 9499 TTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGT 9553 ||||||| || | | || || ||||| || | || || || | ||||| || Sbjct 282 TTCAACAGGATACACCTGAAGACTATGTTATATCCACCGGAGAATCTCATTCTGT 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627202440381600