Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq101764 86.0 1e-12 >seq101764 Length=1414 Score = 86.0 bits (94), Expect = 1e-12 Identities = 160/237 (68%), Gaps = 15/237 (6%) Strand=Plus/Minus Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCA 24854 ||||| || ||||| | | |||| | ||| | ||||| |||||| ||| | ||| Sbjct 885 TCAGTCAAAATGCGCAGTAATGGTACATTTTGTCCATCAAAAAATGGTATTACTCTGTCA 826 Query 24855 TTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACT 24914 || || | || |||| | ||||| ||||| | |||||| || |||||| Sbjct 825 TTGAGTAAGTCGGCAGATGTAATAGCTGTCTTATCTACATAAAGCTTAGCAAAC------ 772 Query 24915 TTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCC 24974 || ||||||||||| || || || |||||||| || || || || |||| ||||| Sbjct 771 -TAGAATAAGTATCAATGAAAGTCTGCTGATAAATTCGCCCAACACCCTTGATATTGCCT 713 Query 24975 ACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031 ||||| |||| ||||| | || | ||| ||| |||||||||| |||| Sbjct 712 ACATAATAAGTGTCTTGATAACCCAAATAACCA--------TGTTTCAATTTTACCA 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114179742318452