Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq64116 118 9e-22 >seq64116 Length=3934 Score = 118 bits (130), Expect = 9e-22 Identities = 224/327 (69%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCT-CATGAGTTCGCAGTTAATTCCAAT 4432 |||| || || || || |||| || || || || |||||| ||||| || || ||||| Sbjct 3268 AGCAGTCTATCGGCCACGTATTCGATGTA-TGTCTTCATGAGATCGCAATTCATGCCAAT 3210 Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | ||||||| | || | || | |||||| ||||| ||| || |||||| | | Sbjct 3209 CAGATTCACAGGCAATGCTTCCGTTAGAAACTCCTGTTCAATAACAACCGCTTCTTTCAC 3150 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 ||| | | ||| || | | ||||||| || | | || || || | | |||||| Sbjct 3149 TATTTGCAAAACTTTCTCCTCATATGGTTTGTTCTCAATGTGTCTGAATAGAAGACACGC 3090 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||||| ||||| | ||||| || | ||| ||||| ||| ||||| ||||| || Sbjct 3089 GAAATCGCAATGAAGTCCTTCATCGCGAGAAATAAGTTCATTACTGAACGTCAATCCAGG 3030 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | || | |||||||||||| ||||| | || || || ||| |||||| || || Sbjct 3029 CATAAGTCCGCGCTTTTTAAGCCAGAATATGGAAGCGAAGGAACCACTAAAGAAAATTCC 2970 Query 4673 TTCTACGGCGGCAAACGCTACTAATCG 4699 ||| || | || || || || || || Sbjct 2969 TTCGACTGACGCGAAAGCGACCAAACG 2943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426499617633443