Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq64116 127 3e-24 >seq64116 Length=3934 Score = 127 bits (140), Expect = 3e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 || ||| || || || || ||||| || || ||||| |||||||| || ||| ||||| Sbjct 2565 CAGATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAA 2506 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || ||||||| || | ||||||||||| || | | ||| | | ||||||||| Sbjct 2505 ATGCTTTTCATTCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTC 2446 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 ||| |||||||||| || ||||| ||||| |||||||| | ||| || || ||||| Sbjct 2445 TTCTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTC 2386 Query 47193 GATCGGAAAAATAACAAATCTATTTGGATT 47222 ||||||||| | || || | ||||||| Sbjct 2385 GATCGGAAATACGACGAAACGCCTTGGATT 2356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711992693862720