Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq97621 82.4 6e-11 >seq97621 Length=3513 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||||||| || |||||||| | || || || Sbjct 3502 AATGCAGATATTTGTGAAGACATTGACCGGAAAGACCATTACTTTAGAGGTTGAGCCGTC 3443 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 |||| | ||| | || ||| |||||| |||||||||||| |||| ||||| Sbjct 3442 CGATACCATTGAGAATGTGAAAGCAAAAATCCAGGACAAAGAAGGCATTCCTCCGGATCA 3383 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276 || || ||||| | || || ||||| | |||||| | | ||| | ||| || Sbjct 3382 GCAGAGACTTATCTTCGCTGGAAAACAGCTCGAAGATGGCCGCACACTCAG--CGACTAC 3325 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 ||||| || ||||| || || || ||| | || | ||| | ||||||||| Sbjct 3324 AATATCCAGAAAGAGTCAACCCTCCATCTGGTCCTTCGTTTACGCGGTGGC 3274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421267963987096