Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq64116 89.7 5e-13 seq101000 86.0 7e-12 >seq64116 Length=3934 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 ||||||||||||||| ||||| || || |||||||| || | || | | ||||||||| Sbjct 2562 ATTTTCGTTAACAATCCCATCGCTGGCGGCAAAGAATGCCAACACGTGTGATATAAAATG 2503 Query 23958 TCTTTCATCAGTTGATAA-TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCAT 24016 |||||| || ||| ||| |||||||| | | ||| | | ||| ||||| | Sbjct 2502 CTTTTCAT-TCTTATTAAGTTTATTCCAATCGCTTAAGTCTCTCCCGAGATCTACTTCTT 2444 Query 24017 CAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTA 24076 | |||||||| || ||| || ||||||||| ||||||| || ||| || | Sbjct 2443 CTACTGTCCAGAAGGAGGCCTCAGCTTTCTTATACATCTGCCAAATGTCCGTATATTCGA 2384 Query 24077 TTGGAAATATTACGAA 24092 | ||||||| ||||| Sbjct 2383 TCGGAAATACGACGAA 2368 >seq101000 Length=1570 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 139453 ATTGTTGATAATAAACATATATATATTGGAAGTGCTAACATGGACTGGCGATCACTAACT 139512 ||||||||||| || ||| | |||||||||||||| || ||||||||| ||||| | ||| Sbjct 1213 ATTGTTGATAACAAGCATTTCTATATTGGAAGTGCAAATATGGACTGGAGATCATTGACT 1154 Query 139513 CAAGTAAAAGAATTAGGTAT 139532 ||||| |||||| | || || Sbjct 1153 CAAGTCAAAGAAATGGGAAT 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520799173019400